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1

Tackling antibiotic resistance: the environmental framework

Berendonk, Thomas U., Manaia, Célia M., Merlin, Christophe, Fatta-Kassinos, Despo, Cytryn, Eddie, Walsh, Fiona, Bürgmann, Helmut, Sørum, Henning, Norström, Madelaine, Pons, Marie-Noëlle, Kreuzinger, N

Journal:

Nature Reviews Microbiology

Year:

2015

Language:

english

File:

PDF, 441 KB

english, 2015

2

The mitochondrial genome sequence of the ciliateParamecium caudatumreveals a shift in nucleotide composition and codon usage within the genusParamecium

Dana Barth, Thomas U Berendonk

Journal:

Year:

2011

Language:

english

File:

PDF, 1.24 MB

english, 2011

3

Phylogeography and cryptic variation within the Lacerta viridis complex (Lacertidae, Reptilia)

Manja U. Böhme, Uwe Fritz, Tatiana Kotenko, Georg Džukić, Katarina Ljubisavljević, Nikolay Tzankov, Thomas U. Berendonk

Journal:

Zoologica Scripta

Year:

2007

Language:

english

File:

PDF, 318 KB

english, 2007

4

Heavy metal driven co-selection of antibiotic resistance in soil and water bodies impacted by agriculture and aquaculture

Seiler, Claudia, Berendonk, Thomas U.

Journal:

Frontiers in Microbiology

Year:

2012

Language:

english

File:

PDF, 486 KB

english, 2012

5

A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants

Marano, Roberto B.M., Fernandes, Telma, Manaia, CÃ©lia M., Nunes, Olga, Morrison, Donald, Berendonk, Thomas U., Kreuzinger, Norbert, Telson, Tanel, Corno, Gianluca, Fatta-Kassinos, Despo, Merlin, Chri

Journal:

Environment International

Year:

2020

File:

PDF, 1.30 MB

2020

6

Cytochrome b sequence data suggest rapid speciation within the Paramecium aurelia species complex

Dana Barth, Ewa Przyboś, Sergei I. Fokin, Martin Schlegel, Thomas U. Berendonk

Journal:

Molecular Phylogenetics and Evolution

Year:

2008

Language:

english

File:

PDF, 384 KB

english, 2008

7

Small edge populations at risk: genetic diversity of the green lizard (Lacerta viridis viridis) in Germany and implications for conservation management

Manja U. Böhme, Norbert Schneeweiß, Uwe Fritz, Martin Schlegel, Thomas U. Berendonk

Journal:

Conservation Genetics

Year:

2007

Language:

english

File:

PDF, 223 KB

english, 2007

8

How to assess hydromorphology? A comparison of Ukrainian and German approaches

Nicole Scheifhacken, Ulrike Haase, Lesya Gram-Radu, Roman Kozovyi, Thomas U. Berendonk

Journal:

Environmental Earth Sciences

Year:

2012

Language:

english

File:

PDF, 315 KB

english, 2012

9

PHYLOGENETICS OF POND AND LAKE LIFESTYLES IN CHAOBORUS MIDGE LARVAE

Thomas U. Berendonk, Timothy G. Barraclough, Jonelle C. Barraclough

Journal:

Year:

2003

Language:

english

File:

PDF, 102 KB

english, 2003

10

Divergence and diversity: lessons from an arctic–alpine distribution (Pardosa saltuaria group, Lycosidae)

CHRISTOPH MUSTER, THOMAS U. BERENDONK

Journal:

Molecular Ecology

Year:

2006

Language:

english

File:

PDF, 347 KB

english, 2006

11

Strong genetic differentiation and postglacial origin of populations in the marine midge Clunio marinus (Chironomidae, Diptera)

TOBIAS S. KAISER, DIETRICH NEUMANN, DAVID G. HECKEL, THOMAS U. BERENDONK

Journal:

Molecular Ecology

Year:

2010

Language:

english

File:

PDF, 542 KB

english, 2010

12

High mitochondrial haplotype diversity of Coleps sp. (Ciliophora: Prostomatida)

Dana Barth, Karolin Tischer, Helmut Berger, Martin Schlegel, Thomas U. Berendonk

Journal:

Environmental Microbiology

Year:

2008

Language:

english

File:

PDF, 172 KB

english, 2008

13

Intraspecific Genetic Variation in Paramecium Revealed by Mitochondrial Cytochrome c Oxidase I Sequences

DANA BARTH, SASCHA KRENEK, SERGEI I. FOKIN, THOMAS U. BERENDONK

Journal:

Journal of Eukaryotic Microbiology

Year:

2006

Language:

english

File:

PDF, 169 KB

english, 2006

14

A PCR-Based Method to Distinguish the Sibling Species Stylonychia mytilus and Stylonychia lemnae (Ciliophora, Spirotrichea) Using Isocitrate Dehydrogenase Gene Sequences

MADLEN HAENTZSCH, STEPHANIE L. SCHMIDT, DETLEF BERNHARD, DIETER AMMERMANN, THOMAS U. BERENDONK, MARTIN SCHLEGEL

Journal:

Journal of Eukaryotic Microbiology

Year:

2006

Language:

english

File:

PDF, 239 KB

english, 2006

15

Thermal performance curves of Paramecium caudatum: A model selection approach

Sascha Krenek, Thomas U. Berendonk, Thomas Petzoldt

Journal:

European Journal of Protistology

Year:

2011

Language:

english

File:

PDF, 432 KB

english, 2011

16

A Long-Term Conservation Tool for Cell Characteristics: Cryopreservation of Paramecium caudatum

Sascha Krenek, Thomas U. Berendonk

Journal:

Year:

2009

Language:

english

File:

PDF, 356 KB

english, 2009

17

Gene flow within and between regions: The population genetic structure of the phantom midge Chaoborus crystallinus (Diptera: Chaoboridae)

Thomas Berendonk, Ken Spitze

Journal:

Limnologica - Ecology and Management of Inland Waters

Year:

2006

Language:

english

File:

PDF, 294 KB

english, 2006

18

A phenomenological approach shows a high coherence of warming patterns in dimictic aquatic systems across latitude

Annekatrin Wagner, Stephan Hülsmann, Lothar Paul, Rüdiger J. Paul, Thomas Petzoldt, René Sachse, Thomas Schiller, Bettina Zeis, Jürgen Benndorf, Thomas U. Berendonk

Journal:

Year:

2012

Language:

english

File:

PDF, 593 KB

english, 2012

19

THE PHANTOM MIDGE AND A COMPARISON OF METAPOPULATION STRUCTURES

Berendonk, Thomas U., Bonsall, Michael B.

Journal:

Year:

2002

Language:

english

File:

PDF, 189 KB

english, 2002

20

Systematics and species-specific response to pH of Oxytricha acidotolerans sp. nov. and Urosomoida sp. (Ciliophora, Hypotricha) from acid mining lakes

Weisse, Thomas, Moser, Michael, Scheffel, Ulrike, Stadler, Peter, Berendonk, Thomas, Weithoff, Guntram, Berger, Helmut

Journal:

European Journal of Protistology

Year:

2013

Language:

english

File:

PDF, 1.18 MB

english, 2013

21

Convergent evolution of heat-inducibility during subfunctionalization of the Hsp70 gene family

Sascha Krenek, Martin Schlegel, Thomas U Berendonk

Journal:

BMC Evolutionary Biology

Year:

2013

Language:

english

File:

PDF, 582 KB

english, 2013

22

Influence of Fish Kairomones on the Ovipositing Behavior of Chaoborus Imagines

Thomas U. Berendonk

Journal:

Limnology and Oceanography

Year:

1999

Language:

english

File:

PDF, 781 KB

english, 1999

23

Movement Response of Chaoborus to Chemicals from a Predator and Prey

Thomas U. Berendonk and W. John O'Brien

Journal:

Limnology and Oceanography

Year:

1996

Language:

english

File:

PDF, 664 KB

english, 1996

24

Environmental and public health implications of antibiotic-resistance genes in municipal wastewaters

Serena Caucci,Thomas U. Berendonk

Journal:

Prävention und Gesundheitsförderung

Year:

2014

Language:

english

File:

PDF, 658 KB

english, 2014

25

Fish predation can induce mesohabitat-specific differences in food web structures in small stream ecosystems

Worischka, Susanne, Hellmann, Claudia, Berendonk, Thomas U., Winkelmann, Carola

Journal:

Aquatic Ecology

Year:

2014

Language:

english

File:

PDF, 380 KB

english, 2014

26

Nanoparticles in wastewater treatment plants: a novel acute toxicity test for ciliates and its implementation in risk assessment

Burkart, Corinna, von Tümpling, Wolf, Berendonk, Thomas, Jungmann, Dirk

Journal:

Environmental Science and Pollution Research

Year:

2015

Language:

english

File:

PDF, 485 KB

english, 2015

27

NewParamecium(Ciliophora, Oligohymenophorea) congeners shape our view on its biodiversity

Krenek, Sascha, Berendonk, Thomas U., Fokin, Sergei I.

Journal:

Organisms Diversity & Evolution

Year:

2015

Language:

english

File:

PDF, 1.57 MB

english, 2015

28

PHYLOGENETICS OF POND AND LAKE LIFESTYLES IN CHAOBORUS MIDGE LARVAE

Berendonk, Thomas U., Barraclough, Timothy G., Barraclough, Jonelle C.

Journal:

Year:

2003

Language:

english

File:

PDF, 111 KB

english, 2003

29

The effects of fish kairomones and food availability on the predator avoidance behaviour of Gammarus pulex

Szokoli, Franziska, Winkelmann, Carola, Berendonk, Thomas U., Worischka, Susanne

Journal:

Fundamental and Applied Limnology / Archiv für Hydrobiologie

Year:

2015

Language:

english

File:

PDF, 565 KB

english, 2015

30

Influence of fish kairomones on the ovipositing behavior of Chaoborus imagines

Berendonk, Thomas U.

Journal:

Limnology and Oceanography

Year:

1999

Language:

english

File:

PDF, 74 KB

english, 1999

31

Movement response of Chaoborus to chemicals from a predator and prey

BERENDONK, THOMAS U., O'BRIEN, W. JOHN

Journal:

Limnology and Oceanography

Year:

1996

Language:

english

File:

PDF, 657 KB

english, 1996

32

Seasonality of antibiotic prescriptions for outpatients and resistance genes in sewers and wastewater treatment plant outflow

Caucci, Serena, Karkman, Antti, Cacace, Damiano, Rybicki, Marcus, Timpel, Patrick, Voolaid, Veiko, Gurke, Robert, Virta, Marko, Berendonk, Thomas U., Smalla, Kornelia

Journal:

FEMS Microbiology Ecology

Year:

2016

Language:

english

File:

PDF, 880 KB

english, 2016

33

The Phantom Midge and a Comparison of Metapopulation Structures

Thomas U. Berendonk and Michael B. Bonsall

Journal:

Year:

2002

Language:

english

File:

PDF, 2.49 MB

english, 2002

34

Long-term selection experiment produces breakdown of horizontal transmissibility in parasite with mixed transmission mode

Dusi, Eike, Gougat-Barbera, Claire, Berendonk, Thomas U., Kaltz, Oliver

Journal:

Year:

2015

Language:

english

File:

PDF, 296 KB

english, 2015

35

Phylogenetics of Pond and Lake Lifestyles in Chaoborus Midge Larvae

Thomas U. Berendonk, Timothy G. Barraclough and Jonelle C. Barraclough

Journal:

Year:

2003

Language:

english

File:

PDF, 1.33 MB

english, 2003

36

High throughput analysis of integron gene cassettes in wastewater environments

Gatica, Joao, Tripathi, Vijay, Green, Stefan J, Manaia, Célia M., Berendonk, Thomas, Cacace, Damiano, Merlin, Christophe, Kreuzinger, Norbert, Schwartz, Thomas, Fatta-Kassinos, Despo, Rizzo, Luigi, Sc

Journal:

Environmental Science & Technology

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

37

Disentangling the taxonomy of Rickettsiales and description of two novel symbionts (“ Candidatus Bealeia paramacronuclearis” and “ Candidatus Fokinia cryptica”) sharing the cytoplasm of the ciliate protist Paramecium biaurelia

Szokoli, Franziska, Castelli, Michele, Sabaneyeva, Elena, Schrallhammer, Martina, Krenek, Sascha, Doak, Thomas G., Berendonk, Thomas U., Petroni, Giulio

Journal:

Applied and Environmental Microbiology

Year:

2016

Language:

english

File:

PDF, 6.21 MB

english, 2016

38

Origin and Evolution of Antibiotic Resistance: The Common Mechanisms of Emergence and Spread in Water Bodies

Lupo, Agnese, Coyne, Sébastien, Berendonk, Thomas Ulrich

Journal:

Frontiers in Microbiology

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

39

Population Genomics of Paramecium Species

Johri, Parul, Krenek, Sascha, Marinov, Georgi K., Doak, Thomas G., Berendonk, Thomas U., Lynch, Michael

Journal:

Molecular Biology and Evolution

Year:

2017

Language:

english

File:

PDF, 3.07 MB

english, 2017

40

Conjugative plasmids enable the maintenance of low cost non-transmissible plasmids

Werisch, Martin, Berger, Uta, Berendonk, Thomas U.

Journal:

Year:

2017

Language:

english

File:

PDF, 2.60 MB

english, 2017

41

An R-package to boost fitness and life expectancy of environmental models

Kneis, David, Petzoldt, Thomas, Berendonk, Thomas U.

Journal:

Environmental Modelling & Software

Year:

2017

Language:

english

File:

PDF, 597 KB

english, 2017

42

Rediscovering the genus Lyticum, multiflagellated symbionts of the order Rickettsiales

Boscaro, Vittorio, Schrallhammer, Martina, Benken, Konstantin A., Krenek, Sascha, Szokoli, Franziska, Berendonk, Thomas U., Schweikert, Michael, Verni, Franco, Sabaneyeva, Elena V., Petroni, Giulio

Journal:

Scientific Reports

Year:

2013

Language:

english

File:

PDF, 2.08 MB

english, 2013

43

Extended Spectrum Beta-Lactamase (ESBL)-producing bacteria isolated from hospital wastewaters, rivers and aquaculture sources in Nigeria

Adelowo, Olawale Olufemi, Caucci, Serena, Banjo, Omowunmi Abosede, Nnanna, Ozioma Chinyere, Awotipe, Eunice Olubunmi, Peters, Florence Bosede, Fagade, Obasola Ezekiel, Berendonk, Thomas U.

Journal:

Environmental Science and Pollution Research

Year:

2017

Language:

english

File:

PDF, 508 KB

english, 2017

44

Report of the 2017 meeting of the German Society for Protozoology

Krenek, Sascha, Szokoli, Franziska, Berendonk, Thomas U.

Journal:

European Journal of Protistology

Year:

2017

Language:

english

File:

PDF, 63 KB

english, 2017

45

Grazing resistance of bacterial biofilms: a matter of predators’ feeding trait

Seiler, Claudia, van Velzen, Ellen, Neu, Thomas R., Gaedke, Ursula, Berendonk, Thomas U., Weitere, Markus

Journal:

FEMS Microbiology Ecology

Year:

2017

Language:

english

File:

PDF, 664 KB

english, 2017

46

Antibiotic resistome in landfill leachate from different cities of China deciphered by metagenomic analysis

Zhao, Renxin, Feng, Jie, Yin, Xiaole, Liu, Jie, Fu, Wenjie, Berendonk, Thomas U., Zhang, Tong, Li, Xiaoyan, Li, Bing

Journal:

Year:

2018

Language:

english

File:

PDF, 1.88 MB

english, 2018

47

The Genome Sequence of “Candidatus Fokinia solitaria”: Insights on Reductive Evolution in Rickettsiales

Floriano, Anna M, Castelli, Michele, Krenek, Sascha, Berendonk, Thomas U, Bazzocchi, Chiara, Petroni, Giulio, Sassera, Davide

Journal:

Genome Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 356 KB

english, 2018

48

Inducible defense destabilizes predator-prey dynamics: the importance of multiple predators

van Velzen, Ellen, Thieser, Tamara, Berendonk, Thomas, Weitere, Markus, Gaedke, Ursula

Journal:

Year:

2018

Language:

english

File:

PDF, 457 KB

english, 2018

49

High genomic diversity of multi-drug resistant wastewater Escherichia coli

Mahfouz, Norhan, Caucci, Serena, Achatz, Eric, Semmler, Torsten, Guenther, Sebastian, Berendonk, Thomas U., Schroeder, Michael

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 2.95 MB

english, 2018

50

Coping with Temperature at the Warm Edge – Patterns of Thermal Adaptation in the Microbial Eukaryote Paramecium caudatum

Krenek, Sascha, Petzoldt, Thomas, Berendonk, Thomas U., Petchey, Owen

Journal:

Year:

2012

Language:

english

File:

PDF, 878 KB

english, 2012

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